A workspace organised around the study.
Labs provide the collaboration boundary; projects hold the recordings, configuration and results. The workspace brings the stages of a study into one navigable record.
Sources & setup
Upload recordings, register experimental metadata and define timestamps and apparatus regions.
Pose estimation
Submit inference and fine-tuning jobs to hosted GPUs; inspect their progress and resulting artefacts.
Annotation & review
Claim review tasks, publish reviewed annotations and retain corrections as explicit inputs.
Analysis
Compare configuration versions and runs, then inspect individual trajectories and cohort summaries.
Quality & validation
Examine quality reports alongside the recording and the assumptions of the analysis.
Exports
Collect results, configuration and provenance into a research bundle.
Beginning a project.
- Establish the context. Create or open a lab, then create a project for the study.
- Register the source. Upload a recording and identify the animal, cohort and experimental phase.
- Define the apparatus. Mark the relevant regions and check the timestamp segments.
- Run and inspect. Launch the appropriate jobs, examine their outputs and review uncertain observations.
- Validate and export. Retain the report and configuration alongside the data used in the study.
Practical questions.
Do I need a local GPU?
Pose estimation and fine-tuning are dispatched to hosted hardware. The research workspace is accessed through the browser.
Which experiments is Fylgja designed around?
The present workflow centres on mouse behaviour, particularly the three-chamber social interaction assay. Suitability for a different species, camera arrangement or assay requires separate assessment.
Can I inspect an earlier result?
The workspace includes job history, analysis runs, configuration versions and provenance. Use those records to establish which inputs and settings produced the result.
Does a quality report establish biological validity?
A quality report describes checks on a particular run. Behavioural validity is established separately, against independent human assessment. See Evidence.